Details for gene set NCI_PDGFR-BETA SIGNALING PATHWAY[GSEA]

Table: GSEA Results Summary

Dataset	Set_04_DMpreB_versus_WTpreB.phenotype_DMpreB_versus_WTpreB.cls #DMpreB_versus_WTpreB
Phenotype	phenotype_DMpreB_versus_WTpreB.cls#DMpreB_versus_WTpreB
Upregulated in class	WTpreB
GeneSet	NCI_PDGFR-BETA SIGNALING PATHWAY
Enrichment Score (ES)	-0.7783024
Normalized Enrichment Score (NES)	-1.6073492
Nominal p-value	0.0
FDR q-value	0.045553137
FWER p-Value	0.379

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BCAR1	18741	1602	0.499	-0.0545	No
2	HRAS	4868	2695	0.167	-0.1027	No
3	SLC9A3R2	23089 1544 1514	3066	0.100	-0.1162	No
4	SHC1	9813 9812 5430	3966	0.042	-0.1620	No
5	AKT1	8568	4238	0.034	-0.1744	No
6	FYN	3375 3395 20052	5080	0.020	-0.2184	No
7	SNX15	23993 3761	5228	0.019	-0.2252	No
8	SPHK1	5484 1266 1402	5477	0.016	-0.2375	No
9	SRC	5507	5732	0.014	-0.2503	No
10	STAT5B	20222	7328	0.007	-0.3357	No
11	SHB	10493	7716	0.005	-0.3562	No
12	HIF1A	4850	7749	0.005	-0.3576	No
13	NCK1	9447 5152	7822	0.005	-0.3612	No
14	GRB10	4799	8037	0.005	-0.3724	No
15	PDGFB	22199 2311	8208	0.004	-0.3813	No
16	PTPN2	23414	8307	0.004	-0.3864	No
17	ACP1	4317	9230	0.002	-0.4359	No
18	PTPN11	5326 16391 9660	9360	0.001	-0.4428	No
19	LYN	16281	10463	-0.001	-0.5021	No
20	YES1	5930	10960	-0.003	-0.5286	No
21	LRP1	9284	11848	-0.005	-0.5761	No
22	DOK1	17104 1018 1177	12045	-0.006	-0.5862	No
23	PIK3R1	3170	12501	-0.008	-0.6103	No
24	PLCG1	14753	12673	-0.009	-0.6189	No
25	SOS1	5476	13043	-0.010	-0.6381	No
26	PDGFRB	23539	13448	-0.013	-0.6591	No
27	PIK3CA	9562	13536	-0.014	-0.6629	No
28	ABL1	2693 4301 2794	14038	-0.020	-0.6886	No
29	GRB7	20673	14467	-0.028	-0.7099	No
30	CBL	19154	14583	-0.031	-0.7141	No
31	VAV2	5848 2670	14953	-0.044	-0.7311	No
32	STAT5A	20664	15080	-0.050	-0.7347	No
33	MYC	22465 9435	15293	-0.062	-0.7422	No
34	FGR	4723	15710	-0.099	-0.7584	No
35	HCK	14787	15924	-0.131	-0.7615	No
36	PTPN1	5325	16237	-0.200	-0.7655	Yes
37	PTPRJ	9664	16260	-0.207	-0.7536	Yes
38	LCK	15746	16281	-0.210	-0.7412	Yes
39	NCK2	9448	16378	-0.238	-0.7313	Yes
40	RAC1	16302	16592	-0.304	-0.7234	Yes
41	RASA1	10174	16776	-0.365	-0.7100	Yes
42	PRKCD	21897	17066	-0.470	-0.6956	Yes
43	GRB2	20149	17370	-0.613	-0.6729	Yes
44	SLC9A3R1	11250	17565	-0.739	-0.6363	Yes
45	PTEN	5305	18017	-1.128	-0.5887	Yes
46	GAB1	18828	18101	-1.234	-0.5146	Yes
47	STAT1	3936 5524	18114	-1.257	-0.4351	Yes
48	CSK	8805	18193	-1.378	-0.3515	Yes
49	STAT3	5525 9906	18327	-1.720	-0.2492	Yes
50	DNM2	4635 3103	18366	-1.824	-0.1351	Yes
51	BLK	3205 21791	18473	-2.331	0.0077	Yes